{"schema_version":"onlylabs.public_signal.v1","title":"Microsoft Repo: microsoft/Pharmcat-Foundry-Agent","description":"Microsoft repo signal with public source context, captured evidence pages, related signals, and data-business radar classification.","url":"https://onlylabs.fyi/signals/b69b443a-0cba-42ae-9051-590599478698","json_url":"https://onlylabs.fyi/signals/b69b443a-0cba-42ae-9051-590599478698/signal.json","generated_at":"2026-06-11T02:41:47.107293+00:00","org":{"slug":"microsoft","name":"Microsoft","category":"frontier-lab","category_label":"Frontier lab","dossier_url":"https://onlylabs.fyi/labs/microsoft","dossier_json_url":"https://onlylabs.fyi/labs/microsoft/dossier.json"},"related_urls":{"signal":"https://onlylabs.fyi/signals/b69b443a-0cba-42ae-9051-590599478698","signal_json":"https://onlylabs.fyi/signals/b69b443a-0cba-42ae-9051-590599478698/signal.json","source":"https://github.com/microsoft/Pharmcat-Foundry-Agent","lab_dossier":"https://onlylabs.fyi/labs/microsoft","lab_dossier_json":"https://onlylabs.fyi/labs/microsoft/dossier.json","analysis":"https://onlylabs.fyi/analysis/microsoft","analysis_json":"https://onlylabs.fyi/analysis/microsoft/analysis.json","analysis_evidence_json":"https://onlylabs.fyi/analysis/microsoft/evidence.json","category":"https://onlylabs.fyi/frontier","category_json":"https://onlylabs.fyi/frontier.json","category_feed":"https://onlylabs.fyi/frontier/feed.xml","category_signals_json":"https://onlylabs.fyi/signals.json","topic":null,"topic_signals_json":null,"topic_feed":null,"data_business":null},"answer_pack":{"answer":"Microsoft published microsoft/Pharmcat-Foundry-Agent (Python). 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Architecture ``` Browser │ upload VCF ▼ app/app.py (Flask) │ forward VCF ├─────────────────► api/ (FastAPI + PharmCAT container) │ returns phenotype JSON │ profile text ◄───────────────── │ upload phenotype JSON / user-delegation SAS ├─────────────────► Azure Blob Storage │ stream chat ├─────────────────► Azure AI Foundry agent │ └── Azure AI Search (RAG knowledge base) │ citation page lookup └─────────────────► Azure AI Search ``` Project Structure ``` app/ # Flask web UI (this service) app.py # Routes, agent wiring, patient data extraction requirements.txt # Python dependencies Dockerfile # Container image (gunicorn, port 8000) templates/index.html # Single-page chat UI static/css/styles.css # Styles static/favicon.ico #..."},"evidence_pages":[{"url":"https://github.com/microsoft/Pharmcat-Foundry-Agent","final_url":"https://github.com/microsoft/Pharmcat-Foundry-Agent","title":"microsoft/Pharmcat-Foundry-Agent repository metadata","http_status":200,"content_type":"application/json","capture_method":"plain","fetched_at":"2026-06-11T02:41:47.107293+00:00","bytes":18967,"raw_path":"d65b284b300f3266d64eb51829e5eb6c3ab3fdf4017da22ade407354c0ea4791.json","content_hash":"3eeecb6a76acd40560700c423f87d456554d731fa2b2cd90a9fdd1220d0000a3","excerpt_chars":1200,"truncated":true,"excerpt":"microsoft/Pharmcat-Foundry-Agent Language: Python License: MIT Stars: 0 Forks: 0 Open issues: 2 Created: 2026-06-03T16:51:39Z Pushed: 2026-06-08T15:44:41Z Default branch: main Fork: no Archived: no README: PharmCAT — Pharmacogenomics AI Foundry Agent A web app that accepts a patient VCF file, runs it through the [PharmCAT](https://pharmcat.org/) analysis API, and opens a streaming AI chat powered by an Azure AI Foundry agent for pharmacogenomics interpretation. 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